Managed linker scripts are great on one side: the simplify the otherwise complex GNU linker script handling. On the other side it requires knowledge how to tweak them in case ‘non-standard’ behavior is needed.
Bootloaders are a fine thing: With this I can load any applications I like. Power comes with some complexity, and a bootloader alone is a complex thing already. But this applies to the application part too: I need to link the application to a certain offset in the memory space so it can be loaded by the bootloader, plus the application typically needs to add some extra information to be used by the bootloader. This article describes how to build a bootloader application with Eclipse (MCUXpresso IDE) using the MCUXpresso SDK.
Build Configuration for Bootloader Application
MCU on Eclipse 